Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs111626664 chr14:43737204 G/A 2.92E-6 288 26.57 17.35 13.17 KM Plot
KIRP rs111659416 chr22:21193871 G/C 6.78E-7 285 24.3 36.05 17.48 KM Plot
KIRP rs111696408 chr10:43103421 T/C 7.16E-5 288 25.4 27.47 11.43 KM Plot
KIRP rs111703724 chr10:43130944 G/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs11170566 chr12:53907067 C/T 0.000119 280 23.62 30.43 10.85 KM Plot
KIRP rs111713981 chr10:43153845 A/G 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs111774591 chr10:74924054 G/A 1.12E-14 287 26.37 22.8 5.6 KM Plot
KIRP rs111783373 chr3:5463187 G/A 1.78E-5 281 25.37 30.1 11.37 KM Plot
KIRP rs111828680 chr21:44321603 C/T 3.21E-5 287 25.5 43.67 17.28 KM Plot
KIRP rs111829445 chr5:180265996 G/T 3.29E-8 275 24.48 29.95 9.77 KM Plot
KIRP rs111853634 chr21:44272963 C/T 0.000143 287 25.58 40.7 13.07 KM Plot
KIRP rs11185951 chr10:82301536 G/C 0 286 26.28 22.57 6.7 KM Plot
KIRP rs11187206 chr10:94659515 C/G 7.06E-6 289 26.28 24.43 10.97 KM Plot
KIRP rs11187215 chr10:94670849 A/G 7.47E-6 288 26.2 25.4 10.97 KM Plot
KIRP rs111878613 chr10:43115975 C/T 6.87E-5 289 25.57 27.47 11.43 KM Plot